The detailed information of tRNA gene sequence


Sequence ID>WENV170686317
Genome IDLFRM01138751
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 655
End posion on genome 725
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ggaccgccac
tRNA gene sequence 
GCGGGTGTAGTTTAGTGGTAAAACCACAGCCTTCCAAGCTGTTGTCGGGAGTTCGATTCT
CCTCACCCGCTtaa
Downstream region at tRNA end position 
ttgagtacag
Secondary structure (Cloverleaf model)
>WENV170686317	Gly	TCC
                   c      Ttaa ttgagtacag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T C C T C     A
        G A        A      + | | | |     G
      T     T T T G       G G G A G     C
      G     | | | |                 T T
      G     A A A C
        T A        C     TGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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