The detailed information of tRNA gene sequence


Sequence ID>WENV170686328
Genome IDLFRM01139023
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5452
End posion on genome 5525
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
aatttttcgc
tRNA gene sequence 
TGCGGGATTGTGTAACGGTAGCACCCATGACTCTGGATCATGTTGTCCAGGTTCGAATCC
TGGTCCCGCAGCCA
Downstream region at tRNA end position 
tatttatggc
Secondary structure (Cloverleaf model)
>WENV170686328	Gln	CTG
                   c      GCCA tatttatggc
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G G T C C     A
        A A        T      | | | | |     G
      C     T G T G       C C A G G     C
      G     + | | |                 T T
      G     G C A C
        T A        C     TTGT
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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