The detailed information of tRNA gene sequence


Sequence ID>WENV170686402
Genome IDLFRM01142699
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 377
End posion on genome 304
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
actcatttat
tRNA gene sequence 
GCGGGTGTAACTCAATGGTAGAGTGCCAGCTTCCCAAGCTGGTTACGTGGGTTCGATTCC
CATCACCCGCTCCA
Downstream region at tRNA end position 
tgagcccact
Secondary structure (Cloverleaf model)
>WENV170686402	Gly	CCC
                   t      TCCA tgagcccact
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T A C C C     A
        A A        A      + | | | |     G
      T     C T C A       G T G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     TTAC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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