The detailed information of tRNA gene sequence


Sequence ID>WENV170686436
Genome IDLFRM01144219
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 63
End posion on genome 138
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agatttatat
tRNA gene sequence 
TCCTCAATAGCTCAGTTGGTAGAGCATGCGGCTGTTAACCGCAGGGTCGTAGGTTCGAGC
CCTACTTGAGGAGCCA
Downstream region at tRNA end position 
taaaaaagcg
Secondary structure (Cloverleaf model)
>WENV170686436	Asn	GTT
                   t      GCCA taaaaaagcg
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T          C G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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