The detailed information of tRNA gene sequence


Sequence ID>WENV170686451
Genome IDLFRM01144673
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2307
End posion on genome 2231
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aagaggattt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGATAGTTCGAG
TCTATTCAGGCCCACCA
Downstream region at tRNA end position 
tttcttttaa
Secondary structure (Cloverleaf model)
>WENV170686451	Ile	GAT
                   t      ACCA tttcttttaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T T A T C     A
      T G A        A      + | | | |     G
    T       C T C G       G A T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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