The detailed information of tRNA gene sequence


Sequence ID>WENV170686494
Genome IDLFRM01147388
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 17520
End posion on genome 17445
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tctccaccac
tRNA gene sequence 
GCCGGCTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGCGGGTTCAAGT
CCTGCAGCCGGCACCA
Downstream region at tRNA end position 
tgttatatat
Secondary structure (Cloverleaf model)
>WENV170686494	Thr	TGT
                   c      ACCA tgttatatat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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