The detailed information of tRNA gene sequence


Sequence ID>WENV170686535
Genome IDLFRM01149293
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1398
End posion on genome 1473
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ccagccacat
tRNA gene sequence 
GATCCATTAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGAGTCCCGCGTTCGAGT
CGCGGATGGCTCACCA
Downstream region at tRNA end position 
tttcggcccc
Secondary structure (Cloverleaf model)
>WENV170686535	Lys	TTT
                   t      ACCA tttcggcccc
                     G - C
                     A - T
                     T   C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G G C G C     A
      T G A        A      | | | | |     G
    T       C T C G       C C G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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