The detailed information of tRNA gene sequence


Sequence ID>WENV170686536
Genome IDLFRM01149293
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1478
End posion on genome 1552
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcaccatttc
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACGCGGGTTCGAGTC
CCGCAGGGGTCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170686536	Glu	TTC
                   c      ACCA nnnnnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       A C T G       G C G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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