The detailed information of tRNA gene sequence


Sequence ID>WENV170686546
Genome IDLFRM01150432
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 297
End posion on genome 223
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accaaaacac
tRNA gene sequence 
GGCCCGTTGGTCAAGAGGTTAAGACACAAGCCTTTCACGCTTGTAACGGGGGTTCGATTC
CCCCACGGGTCACCA
Downstream region at tRNA end position 
aacctggagc
Secondary structure (Cloverleaf model)
>WENV170686546	Glu	TTC
                   c      ACCA aacctggagc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       A C T G       G G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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