The detailed information of tRNA gene sequence


Sequence ID>WENV170686577
Genome IDLFRM01152332
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 231
End posion on genome 158
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
tccgctccat
tRNA gene sequence 
GCCGATGTAGTTCAATGGTAGAACTCCTGCTTCCCAAGCAGGCGGCGCGGGTTCGATTCC
CGTCATCGGCTCCA
Downstream region at tRNA end position 
acgcttcacg
Secondary structure (Cloverleaf model)
>WENV170686577	Gly	CCC
                   t      TCCA acgcttcacg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T G C C C     A
        A A        A      + | | | |     G
      T     C T T G       G C G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        T     CGGC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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