The detailed information of tRNA gene sequence


Sequence ID>WENV170686586
Genome IDLFRM01152969
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 322
End posion on genome 398
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cccaccaagc
tRNA gene sequence 
GGACCGGTAGTTCAGTTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCCGGTCCGCCA
Downstream region at tRNA end position 
tcgaatgaca
Secondary structure (Cloverleaf model)
>WENV170686586	Asp	GTC
                   c      GCCA tcgaatgaca
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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