The detailed information of tRNA gene sequence


Sequence ID>WENV170686608
Genome IDLFRM01154451
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 576
End posion on genome 486
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
caacgcacct
tRNA gene sequence 
GTCCGGGTGGCGGAATGGTAGACGCGCTAGCTTGAGGTGCTAGTGCCTATTTTATACAGG
CGTGCGGGTTCAAGTCCCGCTCCGGACACCG
Downstream region at tRNA end position 
gtaaggccgg
Secondary structure (Cloverleaf model)
>WENV170686608	Leu	GAG
                   t      ACCG gtaaggccgg
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G C G G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TGCCTATTTTATACAGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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