The detailed information of tRNA gene sequence


Sequence ID>WENV170686611
Genome IDLFRM01154766
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 23059
End posion on genome 23134
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
taaaagtttt
tRNA gene sequence 
CGGGGTGTAGCGCAGCTGGTAGCGCACGTGGTTTGGGACCATGGGGCCGGGGGTTCAAGT
CCTCTCACCCCGACCA
Downstream region at tRNA end position 
gtaaatttaa
Secondary structure (Cloverleaf model)
>WENV170686611	Pro	TGG
                   t      ACCA gtaaatttaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      C G A        A      + | + | |     A
    T       C G C G       G G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGCC
                    C - G
                    G + T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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