The detailed information of tRNA gene sequence


Sequence ID>WENV170686612
Genome IDLFRM01154766
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 23245
End posion on genome 23320
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tatattttac
tRNA gene sequence 
GCTGGTGTAGCTCAGTTGGTAGAGCAGCTGACTTGTAATCAGCAGGTCGGGGGTTCGAAT
CCGTCCACCAGCTCCA
Downstream region at tRNA end position 
aaattaagaa
Secondary structure (Cloverleaf model)
>WENV170686612	Thr	TGT
                   c      TCCA aaattaagaa
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T G C C     A
      T G A        A      | +   | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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