The detailed information of tRNA gene sequence


Sequence ID>WENV170686613
Genome IDLFRM01154799
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 701
End posion on genome 626
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
ttcgcgttgt
tRNA gene sequence
GGGGCTGTAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGTCAGTTCGATC
CTGATCAGCTCCACCA
Downstream region at tRNA end position
ctgatacacg
Secondary structure (Cloverleaf model)
>WENV170686613	Ala	GGC
                   t      ACCA ctgatacacg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T A G T C     A
      C G A        A      + | | | |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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