The detailed information of tRNA gene sequence


Sequence ID>WENV170686627
Genome IDLFRM01155821
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 442
End posion on genome 517
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atatatatgg
tRNA gene sequence 
GGGGGCATAGCTCAGTTGGGAGAGCACCTGCCTTGCACGCAGGGGGTCAGGAGTTCGAGT
CTCCTTGCCTCCACCA
Downstream region at tRNA end position 
ttgaaacttg
Secondary structure (Cloverleaf model)
>WENV170686627	Ala	TGC
                   g      ACCA ttgaaacttg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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