The detailed information of tRNA gene sequence


Sequence ID>WENV170686680
Genome IDLFRM01158871
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 28066
End posion on genome 27991
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
atgattgtgt
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGGGGGTCATAGGTTCGAGC
CCTATAGTGCCCACCA
Downstream region at tRNA end position 
cacatggccc
Secondary structure (Cloverleaf model)
>WENV170686680	Val	TAC
                   t      ACCA cacatggccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A          C G
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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