The detailed information of tRNA gene sequence


Sequence ID>WENV170686683
Genome IDLFRM01158871
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 27802
End posion on genome 27728
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
aagtaaatat
tRNA gene sequence 
GCGGGTTTAACTCAGTGGTAGAGTGTCACCTTGCCAAGGTGAAAGTCGCGAGTTCGAATC
TCGTAACCCGCTCCA
Downstream region at tRNA end position 
gaatgaagaa
Secondary structure (Cloverleaf model)
>WENV170686683	Gly	GCC
                   t      TCCA gaatgaagaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     T G C T C     A
        G A        A      + | | | |     G
      T     C T C A       G C G A G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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