The detailed information of tRNA gene sequence


Sequence ID>WENV170686749
Genome IDLFRM01161817
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 103
End posion on genome 28
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcgattcatc
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCGTCGTTCGCAACGACGAGGTCGGCGGTTCGATC
CCGCCTGGCTCCACCA
Downstream region at tRNA end position 
ggttccatac
Secondary structure (Cloverleaf model)
>WENV170686749	Ala	CGC
                   c      ACCA ggttccatac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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