The detailed information of tRNA gene sequence


Sequence ID>WENV170686774
Genome IDLFRM01163089
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 12933
End posion on genome 13005
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttaactttt
tRNA gene sequence 
GCTGATATAGCTCAGTAGGCAGAGCACATCCTTGGTAAGGATGAGGTCACGCGTTCGATC
CGCGTTATCAGCTttc
Downstream region at tRNA end position 
tgcaggactt
Secondary structure (Cloverleaf model)
>WENV170686774	Thr	GGT
                   t      Tttc tgcaggactt
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          C T
                    T     T G C G C     A
      T G A        A      | | | | |     G
    A       C T C G       A C G C G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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