The detailed information of tRNA gene sequence


Sequence ID>WENV170686814
Genome IDLFRM01164949
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1194
End posion on genome 1119
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ttctgtacgt
tRNA gene sequence 
GGGTCGGTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTGGTCCCGAGTTCGAAT
CTCGGCCGACCCACCA
Downstream region at tRNA end position 
ctagaacaga
Secondary structure (Cloverleaf model)
>WENV170686814	Lys	TTT
                   t      ACCA ctagaacaga
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     G G C T C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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