The detailed information of tRNA gene sequence


Sequence ID>WENV170686830
Genome IDLFRM01165563
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 23712
End posion on genome 23802
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accgtgttac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTACACCTCAAAAGGGT
GTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tattgagtgt
Secondary structure (Cloverleaf model)
>WENV170686830	Ser	GCT
                   c      GCCA tattgagtgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TACACCTCAAAAGGGTGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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