The detailed information of tRNA gene sequence


Sequence ID>WENV170686876
Genome IDLFRM01168444
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 391
End posion on genome 316
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acgcgctagg
tRNA gene sequence 
GGCCCCGTTGTGTAGCGGCCTAGCACGCCGCCCTCTCAAGGCGGTAGCGCGGGTTCGAAT
CCCGTCGGGGCTACAA
Downstream region at tRNA end position 
tgcaaacggc
Secondary structure (Cloverleaf model)
>WENV170686876	Glu	CTC
                   g      ACAA tgcaaacggc
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        T      + | | | |     G
    G       T G T G       G C G G G     C
    G       + | | |                 T T
    C       G C A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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