The detailed information of tRNA gene sequence


Sequence ID>WENV170686886
Genome IDLFRM01168648
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1404
End posion on genome 1478
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ctgattgcgt
tRNA gene sequence 
GTCCCTGTAGTTCAATGGATAGAACAGGTTCCTCCTAAGAATCAGATCCAGGTTCGATTC
CTGGTGGGGACACCA
Downstream region at tRNA end position 
tcatgcttta
Secondary structure (Cloverleaf model)
>WENV170686886	Arg	CCT
                   t      ACCA tcatgcttta
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     G + T          T T
                    T     G G T C C     A
      T A A        A      | | | | |     G
    G       C T T G       C C A G G     C
    G       | | | |                 T T
    A       G A A C
      T A          A     AGAT
                    G - C
                    G + T
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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