The detailed information of tRNA gene sequence


Sequence ID>WENV170686896
Genome IDLFRM01168825
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 233
End posion on genome 317
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ctccaaatac
tRNA gene sequence 
GGAGGATTTCCCGAGCGGCCAAAGGGGGCAGACTGTAAATCTGTTGTCACTGACTTCGGT
GGTTCGAATCCACCATCCTCCACCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170686896	Tyr	GTA
                   c      ACCA annnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C C A C C     A
      C G A        T      | | | | |     G
    G       G C C C       G G T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGTCACTGACTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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