The detailed information of tRNA gene sequence


Sequence ID>WENV170686897
Genome IDLFRM01168825
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 409
End posion on genome 485
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaaataatgt
tRNA gene sequence 
GGGTGCATAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTGTGTCCGGGGTTCGAA
TCCCTGTGCGCTCACCA
Downstream region at tRNA end position 
cattcatagg
Secondary structure (Cloverleaf model)
>WENV170686897	Arg	TCT
                   t      ACCA cattcatagg
                     G - C
                     G + T
                     G - C
                     T + G
                     G - C
                     C - G
                     A - T          T A
                    T     G T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GTGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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