The detailed information of tRNA gene sequence


Sequence ID>WENV170686898
Genome IDLFRM01168825
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 493
End posion on genome 568
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ccacattcat
tRNA gene sequence 
AGGGGATTCGCCAAGTCGGTAAGGCATAGCACTTTGACTGCTACATGCGTAGGTTCGAGT
CCTGCATCCCCTGCCA
Downstream region at tRNA end position 
aataaatatg
Secondary structure (Cloverleaf model)
>WENV170686898	Gln	TTG
                   t      GCCA aataaatatg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     C G T C C     A
      T G A        C      | + | | |     G
    C       A C C G       G T A G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     CATGC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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