The detailed information of tRNA gene sequence


Sequence ID>WENV170686904
Genome IDLFRM01168825
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1076
End posion on genome 1152
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aattaatatg
tRNA gene sequence 
GTGGGTATAGCTCAGTTGGTTAGAGCGCCAGATTGTGGCTCTGGAGGTCGTGAGTTCGAC
TCTCATTATCCACCCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170686904	His	GTG
                   g      CCCA nnnnnnnnnn
                     G - C
                     T - A
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T          T C
                    T     T A C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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