The detailed information of tRNA gene sequence


Sequence ID>WENV170686915
Genome IDLFRM01169346
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 509
End posion on genome 584
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatttattgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCATCGGGCTCATAACCCGAAGGTCGTAGGTTCAAGT
CCTTCCCCCGCAACCA
Downstream region at tRNA end position 
agaaacataa
Secondary structure (Cloverleaf model)
>WENV170686915	Met	CAT
                   t      ACCA agaaacataa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C T T C C     A
      T G A        G      |   | | |     A
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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