The detailed information of tRNA gene sequence


Sequence ID>WENV170686938
Genome IDLFRM01170089
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4289
End posion on genome 4363
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
cgcttcttgT
tRNA gene sequence 
GTCCCGGTAGGGTAGAGGATATCCTAAAAGCCTGCGGAGCTTTTGACCCGGGTTCAAATC
CCGGCCGGGGCGTCg
Downstream region at tRNA end position 
tctgttttcg
Secondary structure (Cloverleaf model)
>WENV170686938	Arg	GCG
                   T      GTCg tctgttttcg
                     G - C
                     T + G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      A G A        A      | | | | |     A
    G       T G G G       C C G G G     C
    G         | | +                 T T
    A       T C C T
      T A          A     TGAC
                    A - T
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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