The detailed information of tRNA gene sequence


Sequence ID>WENV170686940
Genome IDLFRM01170245
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2810
End posion on genome 2886
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcatagggt
tRNA gene sequence 
GGAGCTGTAGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGAA
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
tcatgccgag
Secondary structure (Cloverleaf model)
>WENV170686940	Asp	GTC
                   t      GCCA tcatgccgag
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      A G A        A      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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