The detailed information of tRNA gene sequence


Sequence ID>WENV170686942
Genome IDLFRM01170245
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2968
End posion on genome 3042
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
tcggcaccat
tRNA gene sequence 
GCGGAAGTAGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGCCGCGGGTTCGAATC
CCGTCTTCCGCTCCA
Downstream region at tRNA end position 
taaacgtaaa
Secondary structure (Cloverleaf model)
>WENV170686942	Gly	GCC
                   t      TCCA taaacgtaaa
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G C C C     A
        G A        A      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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