The detailed information of tRNA gene sequence


Sequence ID>WENV170686955
Genome IDLFRM01170680
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 32423
End posion on genome 32349
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gttgtaccgc
tRNA gene sequence 
TCCTCGATAGCTCAACGGTAGAGCATCCGGCTGTTAACCGGAGGGTTGCAGGTTCGAATC
CTGCTCGAGGAGCCA
Downstream region at tRNA end position 
ttatatgcgc
Secondary structure (Cloverleaf model)
>WENV170686955	Asn	GTT
                   c      GCCA ttatatgcgc
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          T A
                    T     C G T C C     A
        A A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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