The detailed information of tRNA gene sequence


Sequence ID>WENV170686967
Genome IDLFRM01171002
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 752
End posion on genome 828
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
caatagatac
tRNA gene sequence 
CGGGGTGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGCCGCGGGTTCAAA
TCCTGCCACCCCGACCA
Downstream region at tRNA end position 
gtttcttcaa
Secondary structure (Cloverleaf model)
>WENV170686967	Pro	TGG
                   c      ACCA gtttcttcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | + | |     A
    T       C G C G       G C G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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