The detailed information of tRNA gene sequence


Sequence ID>WENV170686972
Genome IDLFRM01171089
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6573
End posion on genome 6658
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tagagtatgt
tRNA gene sequence 
GCGGGTGTGGCGGAATGGCAGACGCGCTGGCCTTAGGAGCCAGTTCCACAACCGGAGTAA
GGGTTCAAGTCCCTTTGCCCGCACCA
Downstream region at tRNA end position 
gaaaaaccgg
Secondary structure (Cloverleaf model)
>WENV170686972	Leu	TAG
                   t      ACCA gaaaaaccgg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G + T          T G
                    T     T T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       A A G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TTCCACAACCGGAGT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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