The detailed information of tRNA gene sequence


Sequence ID>WENV170686979
Genome IDLFRM01171463
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 78
End posion on genome 153
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atattaattt
tRNA gene sequence 
GGGGGCTTAGCTCAGATGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTAGCCTCCACCA
Downstream region at tRNA end position 
atttaaaaat
Secondary structure (Cloverleaf model)
>WENV170686979	Ala	TGC
                   t      ACCA atttaaaaat
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A          C T
                    T     T C G C C     A
      A G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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