The detailed information of tRNA gene sequence


Sequence ID>WENV170686999
Genome IDLFRM01172879
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 11075
End posion on genome 11151
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgctccattt
tRNA gene sequence 
GCGCCTGTAGCTCAGCAGGATAGAGCAACGGACTTCTAATCCGTAGGCCAGAGGTTCGAA
TCCTCTCAGGCGCGCCA
Downstream region at tRNA end position 
tttgttttgt
Secondary structure (Cloverleaf model)
>WENV170686999	Arg	TCT
                   t      GCCA tttgttttgt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      | | | | |     G
    A       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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