The detailed information of tRNA gene sequence


Sequence ID>WENV170687013
Genome IDLFRM01173302
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5536
End posion on genome 5610
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
tttaatccga
tRNA gene sequence 
GCGGAAGTGGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGAATC
CCGTCTTCCGCTCCA
Downstream region at tRNA end position 
tttttttgtt
Secondary structure (Cloverleaf model)
>WENV170687013	Gly	GCC
                   a      TCCA tttttttgtt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G C C C     A
        G A        G      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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