The detailed information of tRNA gene sequence


Sequence ID>WENV170687029
Genome IDLFRM01173832
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 521
End posion on genome 446
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gcagtggtgc
tRNA gene sequence 
GGGCTCGTAGCTCAGTGGATAGAGCGTTCGCCTCCGGAGCGAAAGGTCGTGGGTTCGAAT
CCCATCGAGCCCACCA
Downstream region at tRNA end position 
tcttggatca
Secondary structure (Cloverleaf model)
>WENV170687029	Arg	CCG
                   c      ACCA tcttggatca
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T G A        A      + | | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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