The detailed information of tRNA gene sequence


Sequence ID>WENV170687037
Genome IDLFRM01174179
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3969
End posion on genome 4044
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aagcaatgtt
tRNA gene sequence 
GGTGCCATAGCTCAGTTGGTAGAGCAACGGACTGAAAATCCGTGTGTCCCTAGTTCGATT
CTTGGTGGCACCACAA
Downstream region at tRNA end position 
aaagaacact
Secondary structure (Cloverleaf model)
>WENV170687037	Phe	GAA
                   t      ACAA aaagaacact
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     A - T          T T
                    T     G G T T C     A
      T G A        A      | |   | |     G
    T       C T C G       C C T A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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