The detailed information of tRNA gene sequence


Sequence ID>WENV170687152
Genome IDLFRM01179542
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1986
End posion on genome 1915
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
atcaaagagg
tRNA gene sequence 
GGACCCATAGGGTAGAGGATATCCTCTTGGGCTTCGAACCCAAGGACGCGGGTTCGATTC
CCGCTGGGTCCGtcg
Downstream region at tRNA end position 
tttttcttcg
Secondary structure (Cloverleaf model)
>WENV170687152	Arg	TCG
                   g      Gtcg tttttcttcg
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     C G C C C     A
      A G A        A      | | | | |     G
    G       T G G G       G C G G G     C
    G         | | +                 T T
    A       T C C T
      T A          C     GGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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