The detailed information of tRNA gene sequence


Sequence ID>WENV170687169
Genome IDLFRM01180748
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 611
End posion on genome 686
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tctttcggcg
tRNA gene sequence 
GCGGCTGTAGCTCAGTTGGTAGAGTCCCGGATTGTGATTCCGGTTGTCGTGGGTTCGAGC
CCCATCAGTCGCCCCA
Downstream region at tRNA end position 
agaattcaag
Secondary structure (Cloverleaf model)
>WENV170687169	His	GTG
                   g      CCCA agaattcaag
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C          C G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          C     TTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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