The detailed information of tRNA gene sequence


Sequence ID>WENV170687175
Genome IDLFRM01180864
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1371
End posion on genome 1444
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggcacatga
tRNA gene sequence 
AGGGGCGTAGCTCAATTGGCAGAGCAACGGTCTCCAAAACCGTAGGTTGCAGGTTCAAGT
CCTGTCGCCCCTGCag
Downstream region at tRNA end position 
cagtggacgg
Secondary structure (Cloverleaf model)
>WENV170687175	Trp	CCA
                   a      GCag cagtggacgg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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