The detailed information of tRNA gene sequence


Sequence ID>WENV170687176
Genome IDLFRM01180919
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 254
End posion on genome 180
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatcgaatca
tRNA gene sequence 
GGTCCCATAGCTCAGCTGGTTAGAGCACCTGACTCATAATCAGGGAGTCCTTGGTTCAAG
CCCAAGTGGGACCACat
Downstream region at tRNA end position 
aaaagcaaaa
Secondary structure (Cloverleaf model)
>WENV170687176	Met	CAT
                   a      ACat aaaagcaaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     G A A C C     A
      C G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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