The detailed information of tRNA gene sequence


Sequence ID>WENV170687179
Genome IDLFRM01181126
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3049
End posion on genome 2973
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gaaatgtcct
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCAAGCAGGGGGTCAAGGGTTCAAG
TCCCTTATTCTCCACCA
Downstream region at tRNA end position 
ttgaaaattc
Secondary structure (Cloverleaf model)
>WENV170687179	Ala	TGC
                   t      ACCA ttgaaaattc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T G
                    T     T T C C C     A
      C G A        A      | | | | |     A
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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