The detailed information of tRNA gene sequence


Sequence ID>WENV170687187
Genome IDLFRM01181413
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2476
End posion on genome 2404
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttaaatgcca
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTATTCTCCAttg
Downstream region at tRNA end position 
ttgttcttaa
Secondary structure (Cloverleaf model)
>WENV170687187	Ala	TGC
                   a      Attg ttgttcttaa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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