The detailed information of tRNA gene sequence


Sequence ID>WENV170687248
Genome IDLFRM01184951
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 354
End posion on genome 429
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cccaccacgg
tRNA gene sequence 
GCTGGTGTAGCTCAATTGGCAGAGCAGCTGATTTGTAATCAGCAGGTTGCGGGTTCGAGT
CCCATCACCAGCTCCA
Downstream region at tRNA end position 
tcatggaggg
Secondary structure (Cloverleaf model)
>WENV170687248	Thr	TGT
                   g      TCCA tcatggaggg
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
      T A A        A      +   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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