The detailed information of tRNA gene sequence


Sequence ID>WENV170687303
Genome IDLFRM01188085
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 456
End posion on genome 379
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gggcttgaaT
tRNA gene sequence 
GCTGCTATAGTGTAGACCGGCCAATCATGTAGGACTCTCACTCCTACGACTGGGGTTCGA
ATCCCCATAGCAGCATCt
Downstream region at tRNA end position 
tgtttctctg
Secondary structure (Cloverleaf model)
>WENV170687303	Glu	CTC
                   T      ATCt tgtttctctg
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A C C C C     A
    C A G A        A      | | | | |     G
  C         T G T G       T G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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