The detailed information of tRNA gene sequence


Sequence ID>WENV170687344
Genome IDLFRM01189692
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1409
End posion on genome 1483
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
aaattcaaat
tRNA gene sequence
GGCCCATTCGTCTATCGGTTAGGACGCCAGATTTTCATTCTGGAAAGAGGGGTTCGACTC
CCCTATGGGCTACTA
Downstream region at tRNA end position
aataaataga
Secondary structure (Cloverleaf model)
>WENV170687344	Glu	TTC
                   t      ACTA aataaataga
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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