The detailed information of tRNA gene sequence


Sequence ID>WENV170687345
Genome IDLFRM01189692
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1889
End posion on genome 1963
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caaaaaaaat
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCCAGATTTTCATTCTGGAAAGAGGGGTTCGACTC
CCCTATGGGCTACTA
Downstream region at tRNA end position 
aataaaatag
Secondary structure (Cloverleaf model)
>WENV170687345	Glu	TTC
                   t      ACTA aataaaatag
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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